Synapse.org
Search and metadata tools for Synapse scientific data
Discover and explore scientific datasets from collaborative research projects. Search Synapse for genomics, imaging, clinical data on cancer, neurodegenerative diseases, rare diseases, and more. Navigate project hierarchies and get detailed metadata and provenance to understand what datasets contain before you download.
When using an MCP server with Claude, please review Anthropic's data handling policies to understand how your data is processed:
You remain responsible for compliance with any data use restrictions and Synapse Terms of Service
Connection
Connector URL
https://mcp.synapse.org/mcpTools (5)
get_entityget_entity_annotationsget_entity_provenanceget_entity_childrensearch_synapseAbout
Discover and explore scientific datasets from collaborative research projects. Search Synapse for genomics, imaging, clinical data on cancer, neurodegenerative diseases, rare diseases, and more. Navigate project hierarchies and get detailed metadata and provenance to understand what datasets contain before you download.
You can use the Synapse.org connector to:
Search for datasets and projects:
"Search Synapse for genomics datasets related to Alzheimer's disease"
Retrieve entity metadata:
"Get the metadata and provenance information for project syn12345678"
Traverse project hierarchies:
"Show me all the folders and files within the Cancer Research project"