Owkin

Interact with AI agents built for biology

Owkin build AI agents for biology to accelerate drug discovery and de-risk clinical trials. The Owkin connector currently powers HistoPLUS, an agent that transforms H&E slides from the TCGA database into granular, queryable insights. Researchers can use it to quantify distinct cell types, analyze complex spatial tumor microenvironments, and validate hypotheses through cohort-level survival analysis. Use this connector to bridge the gap between raw biological data and actionable patient stratification, starting with histopathology.

Install

1Add the server to Claude Code

claude mcp add --transport http owkin https://mcp.k.owkin.com/mcp

2Sign in

Run /mcp in Claude Code and complete the login flow for this server.

These instructions target Claude Code. Check the publisher's documentation for support in other Claude surfaces; a valid server URL alone does not establish compatibility.

JSON.mcp.json for a shared project

Commit this file so everyone on the project gets the same server.

{
  "mcpServers": {
    "owkin": {
      "type": "http",
      "url": "https://mcp.k.owkin.com/mcp"
    }
  }
}

Tools

  • list_cell_types
  • list_cohorts
  • features_description
  • filter_slides
  • get_histomics
  • display_slide_thumbnail
  • survival_analysis
  • histoplus_help
  • download_histomics

Discussion

Discussion

0